| Protein ZmMADS45 | |
|---|---|
|
ZmMADS45 is a protein in the MADS family.
|
|
| Information | |
| TF Name: | ZmMADS45 |
| Species: | Maize |
| TF Family: | MADS |
| Gene Name(Synonym): | MADS45 |
| Uniprot ID: | K7UH32 |
| Subgenome: | 1 |
Protein ZmMADS45
ZmMADS45 is a protein in the MADS family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF00319 | PF01486 | |
| Zm00001eb260590_T001 |  | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d035053 | DAPseq |  |
sequence | fimo | position |
| Zm00001d035053 | DAPseq |  |
sequence | fimo | position |
| Zm00001d035053 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d035053 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmMADS45 is the regulator
Interactions where ZmMADS45 is the target
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Zm00001eb260590_T001 from maize genome v5
Amino Acid Sequence
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MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00319 |
|
| PF01486 |
|
| PF00319 |
|
| PF00319 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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AGATCGAGGAGCGTAAGGTAGAGGA...
AGATCGAGGAGCGTAAGGTAGAGGAGATATATAGCGCAAGGAGGAGCCTCGCCAACCTCGAAGCTAGTCCAAACTAGTGGGAGGTTGTGTGCAGTGATCGATCGAGGAAGACGAGAAGCTTTTCGCTGCTAGCTACCGCCCGCCCGGTGTCTGTCGATCTGTGACGACCGCCAAGCCGAAGCCAAAAAGGCAGCAGTAGTCGTCAAGTTCATCGATCTCGGCATCGACGACCGCCCGTCCATGGCGCGGGGCAAGGTGCAGCTGCGGCGCATCGAGAACCCGGTGCACCGGCAGGTGACCTTCTGCAAGCGCCGCGCCGGGCTGCTCAAAAAGGCCCGGGAGCTCTCCGTCCTCTGCGACGCCCACGTCGGCATCATCGTCTTCTCCGCGCACGGCAAGCTCTACGACCTCGCCACCTCCGGGACCATGGAAGAGCTGATCGAGAGGTACAGGACTGCCAGCAGCAGAGAAGCAGCCGACGGCTGCGGCGACAATAACAGAATGGACGCAAAGCAAGAAACCATGGTGCTGCAACAGGAAATCAACCTGCTTCAGAAAGGCCTGAGGTACATCTATGGGAACAGAACAAATGAACACATGAATGTTGAAGAACTGAATGCTCTAGAGAGGTACTTGGAGATATGGATGTACAACATCCGCTCTGCAAAGATGCAGATAATGATTCAAGAGATACAAGCACTGAAAAGCAAGGAAGGCATGCTGCAAGCTGCTAACGAAGTTCTTCAGGAGAAGATAGTAGAACAGAGTAGTTTGCTTGACGTAGGCATGGTTGTAGCGGATCAACAGAACGGGCATTTTAGTACAGTCCCACTGGTAGAAGAGATGATCAGTAACCCGCTGACTATACTGAGTGGCTATTCTAACTGTAGGGGCTATTCCTTCTGACACTGTCATGACACCCTGGGGGGCTAACTCTCTGTTGATTACTACTACTAGTGTGTAATACTACCAGTTAATAAAGCTTGTGTAACTTGCCATATAGCCAGCCCTCCAGGAGTGCCCTGGTATTGTATCTGTGTGCTTTTTTTTTACTTCCCATAATAAAGAACTGTTGAGAAGCTCTAA
GRMZM2G117961_T01 from maize genome v3
Amino Acid Sequence
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MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGM
LQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
Nucleotide Sequence
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AGAGATCGAGGAGCGTAAGGTAGAG...
AGAGATCGAGGAGCGTAAGGTAGAGGAGATATATAGCGCAAGGAGGAGCCTCGCCAACCTCGAAGCTAGTCCAAACTAGTGGGAGGTTGTGTGCAGTGATCGATCGAGGAAGACGAGAAGCTTTTCGCTGCTAGCTACCGCCCGCCCGGTGTCTGTCGATCTGTGACGACCGCCAAGCCGAAGCCAAAAAGGCAGCAGTAGTCGTCAAGTTCATCGATCTCGGCATCGACGACCGCCCGTCCATGGCGCGGGGCAAGGTGCAGCTGCGGCGCATCGAGAACCCGGTGCACCGGCAGGTGACCTTCTGCAAGCGCCGCGCCGGGCTGCTCAAAAAGGCCCGGGAGCTCTCCGTCCTCTGCGACGCCCACGTCGGCATCATCGTCTTCTCCGCGCACGGCAAGCTCTACGACCTCGCCACCTCCGGGACCATGGAAGAGCTGATCGAGAGGTACAGGACTGCCAGCAGCAGAGAAGCAGCCGACGGCTGCGGCGACAATAACAGAATGGACGCAAAGCAAGAAACCATGGTGCTGCAACAGGAAATCAACCTGCTTCAGAAAGGCCTGAGGTACATCTATGGGAACAGAACAAATGAACACATGAATGTTGAAGAACTGAATGCTCTAGAGAGGTACTTGGAGATATGGATGTACAACATCCGCTCTGCAAAGATGCAGATAATGATTCAAGAGATACAAGCACTGAAAAGCAAGGAAGGCATGCTGCAAGCTGCTAACGAAGTTCTTCAGGAGAAGATAGTAGAACAGAGTAGTTTGCTTGACGTAGGCATGGTTGTAGCGGATCAACAGAACGGGCATTTTAGTACAGTCCCACTGGTAGAAGAGATGATCAGTAACCCGCTGACTATACTGAGTGGCTATTCTAACTGTAGGGGCTATTCCTTCTGACACTGTCATGACACCCTGGGGGGCTAACTCTCTGTTGATTACTACTACTAGTGTGTAATACTACCAGTTAATAAAGCTTGTGTAACTTGCCATATAGCCAGCCCTCCAGGAGTGCCCTGGTATTGTATCTGTGTGCTTTTTTTTTACTTCCCATAATAAAGAACTGTTGAGAAGCTCTAATGTTGTGCTACTTCTTCCTCGTCAATTGATACAGCAATAGCTACAGTTTTGTAGCAGAGGTGGAATGAACACTCTAAACTCCATCAGTAGTTTGAGAAAACATATCTCGAAAACGGATAGGATTTGCTGTTTACACCAGATTGACCATGGATGAACATAACCCATGACGGAGATGAAAAATGCATTGTCCAGTTGGCTTCCTCAACCAATTCCACACTTATTAGAGAAAACTAGGAAAGAAAAACTAAGAACTCGGCATGAGAGACGTCAATGTTTTGTTGTCACGCTGGTGTGCTCAGTAGAATAGGCATCACTCGATGTGGTTCAGCTCTTCTGGCCTGTTTTTACAGAAGGGAAACAAAGATGGAATTAGAACAAAGAAGGAACCTCCAACATTGTAAAAA
Zm00001d035053_T001 from maize genome v4
Amino Acid Sequence
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MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKACH
GKQLTV
Nucleotide Sequence
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AAGGTAGAGGAGATATATAGCGCAA...
AAGGTAGAGGAGATATATAGCGCAAGGAGGAGCCTCGCCAACCTCGAAGCTAGTCCAAACTAGTGGGAGGTTGTGTGCAGTGATCGATCGAGGAAGACGAGAAGCTTTTCGCTGCTAGCTACCGCCCGCCCGGTGTCTGTCGATCTCCAAAAAGGCAGCAGTAGTCGTCAAGTTCATCGATCTCGGCATCGACGACCGCCCGTCCATGGCGCGGGGCAAGGTGCAGCTGCGGCGCATCGAGAACCCGGTGCACCGGCAGGTGACCTTCTGCAAGCGCCGCGCCGGGCTGCTCAAAAAGGCCCGGGAGCTCTCCGTCCTCTGCGACGCCCACGTCGGCATCATCGTCTTCTCCGCGCACGGCAAGCTCTACGACCTCGCCACCTCCGGGACCATGGAAGAGCTGATCGAGAGGTACAGGACTGCCAGCAGCAGAGAAGCAGCCGACGGCTGCGGCGACAATAACAGAATGGACGCAAAGCAAGAAACCATGGTGCTGCAACAGGAAATCAACCTGCTTCAGAAAGGCCTGAGGTACATCTATGGGAACAGAACAAATGAACACATGAATGTTGAAGAACTGAATGCTCTAGAGAGGTACTTGGAGATATGGATGTACAACATCCGCTCTGCAAAGATGCAGATAATGATTCAAGAGATACAAGCACTGAAAAGCAAGGCATGCCATGGTAAGCAACTGACGGTGTGAATCTGATGTTGTGTGCAGATAGTAGAACAGAGTAGTTTGCTTGACGTAGGCATGGTTGTAGCGGATCAACAGAACGGGCATTTTAGTACAGTCCCACTGGTAGAAGAGATGATCAGTAACCCGCTGACTATACTGAGTGGCTATTCTAACTGTAGGGGCTATTCCTTCTGACACTGTCATGACACCCTGGGGGGCTAACTCTCTGTTGATTACTACTACTAGTGTGTAATACTACCAGTTAATAAAGCTTGTGTAA
Zm00001d035053_T002 from maize genome v4
Amino Acid Sequence
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MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSVLCDAHVGIIVFSAHGKLYDLATSGTMEELIERYRTASSREAAD
GCGDNNRMFLTKRKHFGRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSAKEGMLQAANEVLQEKIVEQSSLLDVGMVV
ADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
Nucleotide Sequence
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GCAAGGAGGAGCCTCGCCAACCTCG...
GCAAGGAGGAGCCTCGCCAACCTCGAAGCTAGTCCAAACTAGTGGGAGGTTGTGTGCAGTGATCGATCGAGGAAGACGAGAAGCTTTTCGCTGCTAGCTACCGCCCGCCCGGTGTCTGTCGATCTCCAAAAAGGCAGCAGTAGTCGTCAAGTTCATCGATCTCGGCATCGACGACCGCCCGTCCATGGCGCGGGGCAAGGTGCAGCTGCGGCGCATCGAGAACCCGGTGCACCGGCAGGTGACCTTCTGCAAGCGCCGCGCCGGGCTGCTCAAAAAGGCCCGGGAGCTCTCCGTCCTCTGCGACGCCCACGTCGGCATCATCGTCTTCTCCGCGCACGGCAAGCTCTACGACCTCGCCACCTCCGGGACCATGGAAGAGCTGATCGAGAGGTACAGGACTGCCAGCAGCAGAGAAGCAGCCGACGGCTGCGGCGACAATAACAGAATGTTTCTGACAAAAAGGAAGCATTTTGGTAGGTACATCTATGGGAACAGAACAAATGAACACATGAATGTTGAAGAACTGAATGCTCTAGAGAGGTACTTGGAGATATGGATGTACAACATCCGCTCTGCAAAGGAAGGCATGCTGCAAGCTGCTAACGAAGTTCTTCAGGAGAAGATAGTAGAACAGAGTAGTTTGCTTGACGTAGGCATGGTTGTAGCGGATCAACAGAACGGGCATTTTAGTACAGTCCCACTGGTAGAAGAGATGATCAGTAACCCGCTGACTATACTGAGTGGCTATTCTAACTGTAGGGGCTATTCCTTCTGACACTGTCATGACACCCTGGGGGGCTAACTCTCTGTTGATTACTACTACTAGTGTGTAATACTACCAGTTAATAAAGCTTGTGTAACTTGCCATATAGCCAGCCCTCCAGGAGTGCCCTGGTATTGTATCTGTGTGCTTTTTTTTTACTTCCCATAATAAAGAACTGTTG
Zm00001d035053_T003 from maize genome v4
Amino Acid Sequence
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MEELIERYRTASSREAADGCGDNNRMDAKQETMVLQQEINLLQKGLRYIYGNRTNEHMNVEELNALERYLEIWMYNIRSA
KMQIMIQEIQALKSKEGMLQAANEVLQEKIVEQSSLLDVGMVVADQQNGHFSTVPLVEEMISNPLTILSGYSNCRGYSF
Nucleotide Sequence
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GCTCAAAAAGGCCCGGGAGCTCTCC...
GCTCAAAAAGGCCCGGGAGCTCTCCGTCCTCTGCGACGCCCACGTCGGCATCATCGTCTTCTCCGCGCACGGCAAGCTCTACGACCTCGCCACCTCCGGGACCATGGAAGAGCTGATCGAGAGGTACAGGACTGCCAGCAGCAGAGAAGCAGCCGACGGCTGCGGCGACAATAACAGAATGGACGCAAAGCAAGAAACCATGGTGCTGCAACAGGAAATCAACCTGCTTCAGAAAGGCCTGAGGTACATCTATGGGAACAGAACAAATGAACACATGAATGTTGAAGAACTGAATGCTCTAGAGAGGTACTTGGAGATATGGATGTACAACATCCGCTCTGCAAAGATGCAGATAATGATTCAAGAGATACAAGCACTGAAAAGCAAGGAAGGCATGCTGCAAGCTGCTAACGAAGTTCTTCAGGAGAAGATAGTAGAACAGAGTAGTTTGCTTGACGTAGGCATGGTTGTAGCGGATCAACAGAACGGGCATTTTAGTACAGTCCCACTGGTAGAAGAGATGATCAGTAACCCGCTGACTATACTGAGTGGCTATTCTAACTGTAGGGGCTATTCCTTCTGACACTGTCATGACACCCTGGGGGGCTAACTCTCTGTTGATTACTACTACTAGTGTGTAATACTACCAGTTAATAAAGCTTGTGTAACTTGCCATATAGCCAGCCCTCCAGGAGTGCCCTGGTATTGTATCTGTGTGCTTTTTTTTTACTTCCCATAATAAAGAACTGTTG
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